Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC092991.1-201ENST00000477176 376 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 AC114811.1-201ENST00000507207 168 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-902P-201ENST00000517212 91 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 AC087685.1-201ENST00000587507 141 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 AL008718.3-201ENST00000610217 321 ntBASIC1.49□□□□□ -2.17
SLC6A13Q9NSD5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-1209P-201ENST00000363655 107 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-457P-201ENST00000363999 107 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 snoU2-30.1-201ENST00000365012 70 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-1289P-201ENST00000384431 106 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.556-201ENST00000384677 113 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 snoU18.1-201ENST00000629629 71 ntBASIC1.48□□□□□ -2.17
SLC6A13Q9NSD5 RNU6-1084P-201ENST00000362498 107 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 RNA5SP190-201ENST00000365222 118 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 SNORA2.2-201ENST00000365473 135 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 MIR568-201ENST00000385036 95 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 MIR653-201ENST00000385279 96 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 AC108667.1-201ENST00000428618 249 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 MTND3P2-201ENST00000438452 342 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 HMGN2P32-201ENST00000444648 269 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 SNORD45.4-201ENST00000516629 73 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 AL513534.2-201ENST00000603836 250 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 AL121890.5-201ENST00000620848 304 ntBASIC1.47□□□□□ -2.17
SLC6A13Q9NSD5 Y_RNA.288-201ENST00000364854 92 ntBASIC1.46□□□□□ -2.18
SLC6A13Q9NSD5 SNORD13-201ENST00000459299 104 ntBASIC1.46□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-917P-201ENST00000516294 104 ntBASIC1.46□□□□□ -2.18
SLC6A13Q9NSD5 AC090049.2-201ENST00000550377 109 ntBASIC1.46□□□□□ -2.18
SLC6A13Q9NSD5 RPL23AP91-201ENST00000569211 455 ntBASIC1.46□□□□□ -2.18
SLC6A13Q9NSD5 AC068700.1-201ENST00000565862 3754 ntBASIC1.46□□□□□ -2.18
SLC6A13Q9NSD5 MIR367-201ENST00000362299 68 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.82-201ENST00000363000 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.92-201ENST00000363043 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.117-201ENST00000363294 101 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.235-201ENST00000364412 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-740P-201ENST00000364734 105 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 SNORD50B-201ENST00000364995 70 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.306-201ENST00000365015 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.312-201ENST00000365089 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.322-201ENST00000365151 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.352-201ENST00000365439 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-211P-201ENST00000384047 107 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 MIR452-201ENST00000385020 85 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 SNORA17.3-201ENST00000391159 129 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.650-201ENST00000459002 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 SNORD11-201ENST00000459124 84 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 NDUFA4P2-201ENST00000489989 244 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-322P-201ENST00000516010 103 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.676-201ENST00000516393 96 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.777-201ENST00000516982 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.771-201ENST00000598668 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.789-201ENST00000622480 102 ntBASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.293-201ENST00000364908 93 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 MIR526A1-201ENST00000384897 85 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 AL451046.2-201ENST00000403074 277 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 MIR1278-201ENST00000408753 81 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 RNU2-38P-201ENST00000410856 79 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 SNORD2.1-201ENST00000458762 69 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 SNORD127-201ENST00000458892 86 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-1007P-201ENST00000516586 107 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 MIR4724-201ENST00000579485 89 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 AC012433.1-201ENST00000588916 398 ntBASIC1.44□□□□□ -2.18
SLC6A13Q9NSD5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 SNORD14E-201ENST00000364009 85 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 MIR526A2-201ENST00000390198 65 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 RNA5SP496-201ENST00000391240 109 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 MIR1298-201ENST00000408783 112 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 AC108729.3-201ENST00000513484 108 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.668-201ENST00000516233 93 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 RNU6-922P-201ENST00000516753 99 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 MIR5688-201ENST00000580619 83 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 MIR3683-201ENST00000580847 82 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 MIR502-201ENST00000606349 86 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.802-201ENST00000614892 130 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
SLC6A13Q9NSD5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.14-201ENST00000362415 103 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.242-201ENST00000364473 110 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 Y_RNA.562-201ENST00000384695 113 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 SNORD41-201ENST00000386967 70 ntBASIC1.42□□□□□ -2.18
SLC6A13Q9NSD5 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms