Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 MTATP6P13-201ENST00000438531 667 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 AC091959.1-201ENST00000495857 238 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 RNU4-49P-201ENST00000516080 140 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 RNU7-129P-201ENST00000516128 62 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 RNU6-448P-201ENST00000517052 107 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 AC040904.1-201ENST00000590850 223 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 AC005176.2-201ENST00000596933 147 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 AC245884.10-201ENST00000597355 337 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 MIR7107-201ENST00000611489 80 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 AC023510.2-201ENST00000622162 746 ntBASIC-0.42□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 SNORD14E-201ENST00000364009 85 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 MIR106A-201ENST00000384870 81 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 MIR802-201ENST00000390235 94 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 SNRPGP14-201ENST00000435400 219 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 AC083904.1-201ENST00000487828 231 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 RNU2-13P-201ENST00000515909 113 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 RNU7-156P-201ENST00000517214 74 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 AC019193.3-201ENST00000609144 554 ntBASIC-0.43□□□□□ -2.48
UPF3BQ9BZI7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 SNORD115-30-201ENST00000364117 82 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 RNU4-30P-201ENST00000410245 143 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 AC090844.1-201ENST00000422019 156 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 RNU6-625P-201ENST00000459412 107 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 MTND3P3-201ENST00000505004 126 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.44□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 SNORA1.1-201ENST00000364671 133 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 SNORD114-12-201ENST00000365400 75 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 RNU6-187P-201ENST00000384139 106 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 MIR760-201ENST00000390220 80 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 SNORA26.5-201ENST00000391215 123 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 RNU7-185P-201ENST00000459215 60 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 AC007751.1-201ENST00000529260 376 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 MIR4528-201ENST00000577763 90 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 AC011921.3-201ENST00000605540 361 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 MIR6740-201ENST00000618268 113 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 SNORD38B-202ENST00000625943 69 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 AC010332.2-201ENST00000613083 1904 ntBASIC-0.45□□□□□ -2.48
UPF3BQ9BZI7 SNORA69-201ENST00000383895 132 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 SNORA72-201ENST00000384339 132 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 RNU6-648P-201ENST00000410190 107 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 RNU6-847P-201ENST00000411115 108 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 RNU4-63P-201ENST00000411313 118 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 RNU6-782P-201ENST00000516852 104 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 RNU7-181P-201ENST00000517234 74 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 RNU6-89P-201ENST00000606519 100 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 AC006157.1-201ENST00000611750 366 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 RN7SL660P-201ENST00000614852 299 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 AC097520.1-201ENST00000624435 385 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 MIR6828-201ENST00000636181 60 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 MIR499B-201ENST00000636498 73 ntBASIC-0.46□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 SNORD115-41-201ENST00000363608 82 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNU6-324P-201ENST00000363957 106 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNY3P5-201ENST00000384127 102 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 MIR196A2-201ENST00000385189 110 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNU6-269P-201ENST00000391077 97 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 AL512326.2-201ENST00000426359 151 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 SNORD4A-201ENST00000459174 72 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNU6-138P-201ENST00000515952 107 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNU2-12P-201ENST00000517216 168 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.47□□□□□ -2.48
UPF3BQ9BZI7 RNY1P16-201ENST00000363063 111 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 RNU6-442P-201ENST00000383968 104 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 SNORA26-201ENST00000391286 122 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 MIR1257-201ENST00000408490 117 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 RNU7-165P-201ENST00000458864 60 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 RNU7-159P-201ENST00000459284 62 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 AC005972.2-201ENST00000604690 348 ntBASIC-0.48□□□□□ -2.49
UPF3BQ9BZI7 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 RNU6-268P-201ENST00000364174 107 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 snoU13.16-201ENST00000459350 104 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 RNU6-469P-201ENST00000516253 101 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 RNU6-835P-201ENST00000516974 104 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 MTATP6P24-201ENST00000576835 677 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 MIR4273-201ENST00000582824 84 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 AC005014.3-201ENST00000605985 190 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 AC027449.1-201ENST00000608890 407 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 AL603755.1-201ENST00000619504 163 ntBASIC-0.49□□□□□ -2.49
UPF3BQ9BZI7 Z69908.1-201ENST00000622603 247 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms