Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AL078595.1-201ENST00000404458 226 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 RNU6-947P-201ENST00000516264 106 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 MIR4724-201ENST00000579485 89 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 AC136443.5-201ENST00000603741 370 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 AL360085.1-201ENST00000604713 532 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 MIR502-201ENST00000606349 86 ntBASIC1.4□□□□□ -2.19
NR1H4Q96RI1 AC092881.1-201ENST00000638218 2733 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 SNORD38C-201ENST00000384381 69 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 MIR526A1-201ENST00000384897 85 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 MIR516B2-201ENST00000385190 85 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 SNORD41-201ENST00000386967 70 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 MIR548F4-201ENST00000408515 105 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 AC015922.2-201ENST00000435593 184 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 snoU13.15-201ENST00000459407 104 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.637-201ENST00000459424 114 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 UBL5P3-201ENST00000475112 231 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.39□□□□□ -2.19
NR1H4Q96RI1 RNU6-327P-201ENST00000516270 127 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 AC104984.5-201ENST00000586878 94 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.39□□□□□ -2.19
NR1H4Q96RI1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
NR1H4Q96RI1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.38□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.38□□□□□ -2.19
NR1H4Q96RI1 MIR1278-201ENST00000408753 81 ntBASIC1.38□□□□□ -2.19
NR1H4Q96RI1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.38□□□□□ -2.19
NR1H4Q96RI1 AP001282.2-201ENST00000616149 309 ntBASIC1.38□□□□□ -2.19
NR1H4Q96RI1 snoU18.1-201ENST00000629629 71 ntBASIC1.38□□□□□ -2.19
NR1H4Q96RI1 MIR335-201ENST00000362173 94 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.162-201ENST00000363683 102 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 RNU6-1289P-201ENST00000384431 106 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 RNA5SP496-201ENST00000391240 109 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 MIR1302-3-201ENST00000408128 138 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 MIR1289-2-201ENST00000408360 111 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 SNORD111.1-201ENST00000516421 86 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.37□□□□□ -2.19
NR1H4Q96RI1 AC006006.1-201ENST00000603082 144 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.802-201ENST00000614892 130 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 MIR7843-201ENST00000622274 79 ntBASIC1.37□□□□□ -2.19
NR1H4Q96RI1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NR1H4Q96RI1 RNU6-1309P-201ENST00000363305 108 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 MIR504-201ENST00000385065 83 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.36□□□□□ -2.19
NR1H4Q96RI1 SNORA25.15-201ENST00000516487 89 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 RNU6-165P-201ENST00000517170 99 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
NR1H4Q96RI1 AL008718.3-201ENST00000610217 321 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 MIR6845-201ENST00000613182 61 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 U2.14-201ENST00000615943 113 ntBASIC1.36□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.47-201ENST00000362697 108 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.483-201ENST00000384380 101 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 RNU6-383P-201ENST00000410864 94 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 MTND2P23-201ENST00000422990 651 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 SNORD11-201ENST00000459124 84 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.35□□□□□ -2.19
NR1H4Q96RI1 SNORA31.4-201ENST00000516049 129 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 RNU6-1045P-201ENST00000516321 107 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.35□□□□□ -2.19
NR1H4Q96RI1 MIR5688-201ENST00000580619 83 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 AC008507.4-201ENST00000585464 127 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
NR1H4Q96RI1 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 RNU6-211P-201ENST00000384047 107 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 MIR526A2-201ENST00000390198 65 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 U8.13-201ENST00000390842 128 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 AL627390.1-201ENST00000396055 340 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 Y_RNA.679-201ENST00000516416 91 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 RNU6-295P-201ENST00000516901 104 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 SNORA74.3-201ENST00000517108 154 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.34□□□□□ -2.19
NR1H4Q96RI1 BX248123.2-201ENST00000606318 124 ntBASIC1.34□□□□□ -2.19
NR1H4Q96RI1 SNORA8.3-201ENST00000384679 139 ntBASIC1.33□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.590-201ENST00000410140 107 ntBASIC1.33□□□□□ -2.2
NR1H4Q96RI1 AL358176.2-201ENST00000425769 204 ntBASIC1.33□□□□□ -2.2
NR1H4Q96RI1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.33□□□□□ -2.2
NR1H4Q96RI1 SCARNA15.1-201ENST00000516384 125 ntBASIC1.33□□□□□ -2.2
NR1H4Q96RI1 SNORA18.7-201ENST00000516910 131 ntBASIC1.33□□□□□ -2.2
NR1H4Q96RI1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.33□□□□□ -2.2
NR1H4Q96RI1 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
NR1H4Q96RI1 MIR26B-201ENST00000362251 77 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.288-201ENST00000364854 92 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 Y_RNA.556-201ENST00000384677 113 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 MIR520C-201ENST00000385005 87 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 MT-TW-201ENST00000387382 68 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 MIR4255-201ENST00000579351 72 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 uc_338.4-201ENST00000616635 176 ntBASIC1.32□□□□□ -2.2
NR1H4Q96RI1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NR1H4Q96RI1 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 306.1 ms