Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MIR802-201ENST00000390235 94 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 SNORD28B-201ENST00000390993 75 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 MIR1302-7-201ENST00000408841 72 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 AF228730.4-201ENST00000421457 183 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 AC024067.1-201ENST00000426199 223 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 AL392103.1-201ENST00000447000 198 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 AC127455.1-201ENST00000565496 145 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 Y_RNA.772-201ENST00000606692 102 ntBASIC0.63□□□□□ -2.31
VPS35Q96QK1 SNORD81.1-201ENST00000363064 77 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 RNU6-654P-201ENST00000364373 107 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 RNU6-442P-201ENST00000383968 104 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 SNORD111-201ENST00000408139 94 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 RBMX2P4-201ENST00000441256 376 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 RNU7-115P-201ENST00000516433 55 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 RNU7-110P-201ENST00000516891 62 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS35Q96QK1 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 MIR548AR-201ENST00000582191 57 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 MIR548AY-201ENST00000617669 107 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 MIR6516-201ENST00000630554 81 ntBASIC0.62□□□□□ -2.31
VPS35Q96QK1 U8.7-201ENST00000364940 136 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 RNY1P14-201ENST00000384426 108 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 MIR518E-201ENST00000385252 88 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 MTCO2P27-201ENST00000420740 428 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 MIR5188-201ENST00000583467 113 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 SNORA4-201ENST00000584302 138 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 AL078603.1-201ENST00000603824 313 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 AC011373.1-201ENST00000607270 237 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 AL132765.2-201ENST00000610812 351 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 AL136317.1-201ENST00000612653 226 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 AC084781.2-201ENST00000615568 161 ntBASIC0.61□□□□□ -2.31
VPS35Q96QK1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
VPS35Q96QK1 RNU6-1115P-201ENST00000362490 106 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 RNU6-1209P-201ENST00000363655 107 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 Y_RNA.796-201ENST00000364268 102 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 SNORD113.3-201ENST00000364630 78 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 Y_RNA.799-201ENST00000364992 102 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 Y_RNA.370-201ENST00000365589 108 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 Y_RNA.390-201ENST00000383932 102 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 Y_RNA.496-201ENST00000384444 101 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS35Q96QK1 AC005534.2-201ENST00000431047 433 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 AC098869.1-201ENST00000481627 292 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 NDUFA4P2-201ENST00000489989 244 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 RNA5SP220-201ENST00000516298 104 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 MIR3145-201ENST00000580727 82 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 AL138825.1-201ENST00000618587 192 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 AC091925.1-201ENST00000623204 462 ntBASIC0.6□□□□□ -2.31
VPS35Q96QK1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VPS35Q96QK1 Y_RNA.39-201ENST00000362620 98 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 Y_RNA.458-201ENST00000384240 102 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 SNRPGP14-201ENST00000435400 219 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS35Q96QK1 RNU7-152P-201ENST00000458982 64 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.59□□□□□ -2.31
VPS35Q96QK1 RNU6-830P-201ENST00000516353 107 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 UBE2V2P2-201ENST00000587677 504 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 AC092447.9-201ENST00000603395 144 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 AL121655.1-201ENST00000605811 308 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 Pinc.1-201ENST00000616452 154 ntBASIC0.59□□□□□ -2.31
VPS35Q96QK1 Y_RNA.187-201ENST00000363918 113 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 SNORA2B-201ENST00000384583 137 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 MIR570-201ENST00000384917 97 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RNU4-30P-201ENST00000410245 143 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RNA5SP95-201ENST00000410319 137 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RNU6-613P-201ENST00000410412 108 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 Y_RNA.632-201ENST00000459189 102 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 HMGN1P10-201ENST00000474557 553 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 Y_RNA.661-201ENST00000516003 99 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 MIR2115-201ENST00000516657 100 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RNU4-77P-201ENST00000516692 156 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 AL355375.2-201ENST00000574825 175 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 AC008507.4-201ENST00000585464 127 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RPS29P30-201ENST00000600975 111 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RMST_2.1-201ENST00000617263 136 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 AC104985.2-201ENST00000620598 500 ntBASIC0.58□□□□□ -2.32
VPS35Q96QK1 RNU6-268P-201ENST00000364174 107 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 Y_RNA.551-201ENST00000384661 102 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 RNU6-21P-201ENST00000384710 107 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 MIR1827-201ENST00000408549 66 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 MTND1P14-201ENST00000427400 950 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 AL160004.2-201ENST00000432935 350 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 MIR2681-201ENST00000581814 105 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 AC012433.1-201ENST00000588916 398 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 AL512605.2-201ENST00000592972 256 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 AL080274.1-201ENST00000605565 220 ntBASIC0.57□□□□□ -2.32
VPS35Q96QK1 Y_RNA.70-201ENST00000362886 110 ntBASIC0.56□□□□□ -2.32
VPS35Q96QK1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
VPS35Q96QK1 RNU6-937P-201ENST00000384325 106 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms