Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MIR518E-201ENST00000385252 88 ntBASIC1.76□□□□□ -2.13
CCDC138Q96M89 RPL39P38-201ENST00000467018 153 ntBASIC1.76□□□□□ -2.13
CCDC138Q96M89 snoU2-30.1-201ENST00000365012 70 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 Y_RNA.396-201ENST00000383949 103 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 RNU6-1289P-201ENST00000384431 106 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 MIR499A-201ENST00000384903 122 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 snoU13.18-201ENST00000459483 104 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 AC092991.1-201ENST00000477176 376 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 SNORD45.4-201ENST00000516629 73 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 AL513534.2-201ENST00000603836 250 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 U2.14-201ENST00000615943 113 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 AL121890.5-201ENST00000620848 304 ntBASIC1.75□□□□□ -2.13
CCDC138Q96M89 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC138Q96M89 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
CCDC138Q96M89 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
CCDC138Q96M89 MIR653-201ENST00000385279 96 ntBASIC1.74□□□□□ -2.13
CCDC138Q96M89 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC138Q96M89 AC087685.1-201ENST00000587507 141 ntBASIC1.74□□□□□ -2.13
CCDC138Q96M89 AL008718.3-201ENST00000610217 321 ntBASIC1.74□□□□□ -2.13
CCDC138Q96M89 RNU6-740P-201ENST00000364734 105 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 Y_RNA.288-201ENST00000364854 92 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 Y_RNA.293-201ENST00000364908 93 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 SNORA2.2-201ENST00000365473 135 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC138Q96M89 RPS27P16-201ENST00000425758 201 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 HMGN2P32-201ENST00000444648 269 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC138Q96M89 RNU6-322P-201ENST00000516010 103 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 RNU6-1007P-201ENST00000516586 107 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 RNU6-295P-201ENST00000516901 104 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 AC090049.2-201ENST00000550377 109 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 RPL23AP91-201ENST00000569211 455 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
CCDC138Q96M89 SNORD50B-201ENST00000364995 70 ntBASIC1.72□□□□□ -2.13
CCDC138Q96M89 SNORA25.9-201ENST00000365087 128 ntBASIC1.72□□□□□ -2.13
CCDC138Q96M89 RNU6-211P-201ENST00000384047 107 ntBASIC1.72□□□□□ -2.13
CCDC138Q96M89 MIR452-201ENST00000385020 85 ntBASIC1.72□□□□□ -2.13
CCDC138Q96M89 MIR568-201ENST00000385036 95 ntBASIC1.72□□□□□ -2.13
CCDC138Q96M89 MTND3P2-201ENST00000438452 342 ntBASIC1.72□□□□□ -2.13
CCDC138Q96M89 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC138Q96M89 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC138Q96M89 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC138Q96M89 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC138Q96M89 Y_RNA.14-201ENST00000362415 103 ntBASIC1.71□□□□□ -2.14
CCDC138Q96M89 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
CCDC138Q96M89 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.71□□□□□ -2.14
CCDC138Q96M89 MIR1278-201ENST00000408753 81 ntBASIC1.71□□□□□ -2.14
CCDC138Q96M89 SNORD127-201ENST00000458892 86 ntBASIC1.71□□□□□ -2.14
CCDC138Q96M89 RPL30P7-201ENST00000479312 323 ntBASIC1.71□□□□□ -2.14
CCDC138Q96M89 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC138Q96M89 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC138Q96M89 MIR4724-201ENST00000579485 89 ntBASIC1.71□□□□□ -2.14
CCDC138Q96M89 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CCDC138Q96M89 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CCDC138Q96M89 MIR367-201ENST00000362299 68 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 Y_RNA.117-201ENST00000363294 101 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 SNORD14E-201ENST00000364009 85 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 Y_RNA.336-201ENST00000365307 109 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 Y_RNA.352-201ENST00000365439 102 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 MIR7-2-201ENST00000384970 110 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 AL451046.2-201ENST00000403074 277 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 MIR1298-201ENST00000408783 112 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 AC023449.1-201ENST00000454464 154 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 RNU6-917P-201ENST00000516294 104 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.7□□□□□ -2.14
CCDC138Q96M89 MIR5688-201ENST00000580619 83 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 AP001485.1-201ENST00000604799 199 ntBASIC1.7□□□□□ -2.14
CCDC138Q96M89 Y_RNA.82-201ENST00000363000 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.92-201ENST00000363043 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 RNY1P10-201ENST00000363268 113 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.116-201ENST00000363292 103 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.235-201ENST00000364412 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.242-201ENST00000364473 110 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.306-201ENST00000365015 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.312-201ENST00000365089 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.322-201ENST00000365151 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 MIR802-201ENST00000390235 94 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 RNA5SP496-201ENST00000391240 109 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 RNU6-383P-201ENST00000410864 94 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.650-201ENST00000459002 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 NDUFA4P2-201ENST00000489989 244 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC138Q96M89 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.69□□□□□ -2.14
CCDC138Q96M89 RNU6-922P-201ENST00000516753 99 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.777-201ENST00000516982 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 AL512310.8-201ENST00000550183 120 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 MIR3664-201ENST00000579074 99 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 AC012433.1-201ENST00000588916 398 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.771-201ENST00000598668 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.802-201ENST00000614892 130 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 Y_RNA.789-201ENST00000622480 102 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
CCDC138Q96M89 MIR489-201ENST00000384923 84 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 MIR526A2-201ENST00000390198 65 ntBASIC1.68□□□□□ -2.14
CCDC138Q96M89 Y_RNA.590-201ENST00000410140 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms