Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MIR1244-1-201ENST00000612829 85 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 AC087588.2-201ENST00000617667 426 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 MTND1P7-201ENST00000632801 297 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 MIR1244-3-201ENST00000635744 85 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 MIR1244-2-201ENST00000636449 85 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 MIR1244-4-202ENST00000636813 85 ntBASIC0.07□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.146-201ENST00000363549 102 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 RNU6-268P-201ENST00000364174 107 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 RNU6-593P-201ENST00000364716 112 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.339-201ENST00000365325 102 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.446-201ENST00000384178 104 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 RNU6-601P-201ENST00000384540 107 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.554-201ENST00000384672 102 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 U8.17-201ENST00000391292 132 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 MIR1197-201ENST00000408818 88 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 AC090844.1-201ENST00000422019 156 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 RNU6-314P-201ENST00000516574 104 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 RNA5SP330-201ENST00000517096 96 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 MIR4771-2-201ENST00000577758 74 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 MIR4771-1-201ENST00000582617 74 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 MIR4676-201ENST00000583078 72 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 MIR4791-201ENST00000607666 84 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 Pinc.1-201ENST00000616452 154 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 AC092794.2-201ENST00000620933 563 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 uc_338.16-201ENST00000621804 95 ntBASIC0.06□□□□□ -2.4
ZIC4Q8N9L1 RNU4-75P-201ENST00000364621 146 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RNU6-442P-201ENST00000383968 104 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RNU6-1323P-201ENST00000384025 107 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.559-201ENST00000384686 107 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 MIR181A1-201ENST00000385026 110 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RNU6-679P-201ENST00000391003 106 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 MIR548F5-201ENST00000408421 86 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 SNORD100-201ENST00000408573 76 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RNA5SP118-201ENST00000410385 109 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 MTND3P10-201ENST00000450967 341 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 AC091959.1-201ENST00000495857 238 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RNA5SP94-201ENST00000516917 108 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RNU7-181P-201ENST00000517234 74 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 RAC1P9-201ENST00000604990 392 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.72-201ENST00000362894 103 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 SNORD118-201ENST00000363593 134 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 RNU6-324P-201ENST00000363957 106 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.310-201ENST00000365063 113 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 RNU6-926P-201ENST00000384075 107 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 RNU6-815P-201ENST00000384080 113 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 RNU6-767P-201ENST00000384132 107 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.450-201ENST00000384198 113 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 RNU6-192P-201ENST00000391253 100 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 MTCO2P33-201ENST00000402100 465 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 MTND4P28-201ENST00000426217 387 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 RPS3AP52-201ENST00000435639 297 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 RPL17P19-201ENST00000489069 552 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 SCARNA8-201ENST00000515924 131 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.708-201ENST00000516950 96 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 MIR4264-201ENST00000583520 66 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 AC008608.1-201ENST00000603910 127 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 AC103591.3-201ENST00000608684 209 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 AC015540.1-201ENST00000615828 501 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 AL109933.3-201ENST00000619095 188 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.203-201ENST00000364106 102 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 RNU6-99P-201ENST00000364721 107 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 SNORA1.2-201ENST00000365189 134 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 RNU6-20P-201ENST00000384106 107 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 AL603910.2-201ENST00000407268 136 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 Y_RNA.592-201ENST00000410274 109 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 AF228730.4-201ENST00000421457 183 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 MTATP6P17-201ENST00000431030 672 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 RNU6-120P-201ENST00000516077 103 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 RNU6-155P-201ENST00000516347 100 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 AC069113.3-201ENST00000521019 150 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 AC008507.4-201ENST00000585464 127 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 SNORA25.18-201ENST00000607153 114 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 JPX_2.1-201ENST00000614161 69 ntBASIC0.03□□□□□ -2.4
ZIC4Q8N9L1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.9-201ENST00000362354 101 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 RNU6-1209P-201ENST00000363655 107 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.194-201ENST00000363985 102 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 RNY3P4-201ENST00000384428 101 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 Y_RNA.517-201ENST00000384551 106 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 MIR625-201ENST00000385047 85 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 FCF1P4-201ENST00000448326 183 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 MIR2053-201ENST00000459295 91 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AC026407.1-201ENST00000518369 204 ntBASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.02□□□□□ -2.41
ZIC4Q8N9L1 AC090897.1-201ENST00000580909 226 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms