Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 AC112487.2-201ENST00000637950 304 ntBASIC1.02□□□□□ -2.25
RPUSD3Q6P087 SNORA63.7-201ENST00000365579 123 ntBASIC1.01□□□□□ -2.25
RPUSD3Q6P087 MIR1302-11-201ENST00000408051 138 ntBASIC1.01□□□□□ -2.25
RPUSD3Q6P087 MIR1302-9-201ENST00000408365 138 ntBASIC1.01□□□□□ -2.25
RPUSD3Q6P087 MIR1302-10-201ENST00000408734 138 ntBASIC1.01□□□□□ -2.25
RPUSD3Q6P087 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.01□□□□□ -2.25
RPUSD3Q6P087 RNU6-507P-201ENST00000516045 100 ntBASIC1.01□□□□□ -2.25
RPUSD3Q6P087 AC040926.1-201ENST00000530195 238 ntBASIC1.01□□□□□ -2.25
RPUSD3Q6P087 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.01□□□□□ -2.25
RPUSD3Q6P087 MIR1302-2-201ENST00000607096 138 ntBASIC1.01□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.58-201ENST00000362807 102 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.112-201ENST00000363250 102 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.143-201ENST00000363520 106 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.154-201ENST00000363624 102 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 RNY3P1-201ENST00000365085 102 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.370-201ENST00000365589 108 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 RNU6-937P-201ENST00000384325 106 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 MTND1P14-201ENST00000427400 950 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 SNORD124-201ENST00000459577 104 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 AC117454.1-201ENST00000491120 168 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 RPS26P48-201ENST00000491713 339 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 RNU11-2P-201ENST00000516898 142 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPUSD3Q6P087 SNORD58B-201ENST00000607313 66 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 AC022709.1-201ENST00000615967 87 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 MIR6788-201ENST00000618842 66 ntBASIC1□□□□□ -2.25
RPUSD3Q6P087 SNORD81.1-201ENST00000363064 77 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 RNU4-73P-201ENST00000363164 141 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 RNU6-969P-201ENST00000383900 105 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.466-201ENST00000384294 113 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.579-201ENST00000390939 94 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 SNORA75.2-201ENST00000391138 150 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 SNORA75.3-201ENST00000391231 150 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 AL590004.1-201ENST00000405321 300 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 RNU2-64P-201ENST00000411315 191 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 SNORD123-201ENST00000459473 70 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 RNU6-1223P-201ENST00000517124 104 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 MIR4795-201ENST00000584182 89 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 AC104695.3-201ENST00000604052 296 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.804-201ENST00000615262 101 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 SEPT14P17-201ENST00000617978 177 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 MIR6767-201ENST00000637302 66 ntBASIC0.99□□□□□ -2.25
RPUSD3Q6P087 SNORD114-27-201ENST00000363766 70 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.330-201ENST00000365230 109 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.354-201ENST00000365448 111 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.383-201ENST00000383855 97 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.98□□□□□ -2.25
RPUSD3Q6P087 AC136628.3-201ENST00000521868 290 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 MIR151B-201ENST00000584249 96 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 AL133255.1-201ENST00000606374 441 ntBASIC0.98□□□□□ -2.25
RPUSD3Q6P087 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RPUSD3Q6P087 RNY1-201ENST00000364228 113 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 U8.7-201ENST00000364940 136 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 RNU4-30P-201ENST00000410245 143 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 AC023449.1-201ENST00000454464 154 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 RNU6-437P-201ENST00000459408 95 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 RPS29P1-201ENST00000465274 159 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
RPUSD3Q6P087 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.97□□□□□ -2.25
RPUSD3Q6P087 Y_RNA.540-201ENST00000384638 111 ntBASIC0.96□□□□□ -2.26
RPUSD3Q6P087 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.96□□□□□ -2.26
RPUSD3Q6P087 AL020996.3-201ENST00000606617 222 ntBASIC0.96□□□□□ -2.26
RPUSD3Q6P087 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
RPUSD3Q6P087 AC090971.5-201ENST00000621102 293 ntBASIC0.96□□□□□ -2.26
RPUSD3Q6P087 RNU6-1209P-201ENST00000363655 107 ntBASIC0.95□□□□□ -2.26
RPUSD3Q6P087 RNU6-674P-201ENST00000363831 107 ntBASIC0.95□□□□□ -2.26
RPUSD3Q6P087 RNY3P14-201ENST00000384309 102 ntBASIC0.95□□□□□ -2.26
RPUSD3Q6P087 MIR613-201ENST00000385248 95 ntBASIC0.95□□□□□ -2.26
RPUSD3Q6P087 SNORA36B-201ENST00000410438 131 ntBASIC0.95□□□□□ -2.26
RPUSD3Q6P087 RPS3AP1-201ENST00000413190 320 ntBASIC0.95□□□□□ -2.26
RPUSD3Q6P087 RNU7-41P-201ENST00000515917 61 ntBASIC0.95□□□□□ -2.26
RPUSD3Q6P087 Y_RNA.80-201ENST00000362996 102 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 SNORA1.2-201ENST00000365189 134 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 Y_RNA.485-201ENST00000384395 102 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 MIR548J-201ENST00000408833 112 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.94□□□□□ -2.26
RPUSD3Q6P087 MTND4LP30-201ENST00000454092 297 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AC067940.1-201ENST00000458411 300 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 RNU6-830P-201ENST00000516353 107 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AP003716.2-201ENST00000528260 108 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AP001094.1-201ENST00000579805 193 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 MIR3145-201ENST00000580727 82 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 Pinc.1-201ENST00000616452 154 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 AC090574.1-201ENST00000623186 233 ntBASIC0.94□□□□□ -2.26
RPUSD3Q6P087 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
RPUSD3Q6P087 Y_RNA.395-201ENST00000383945 109 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 SNORA72.4-201ENST00000384174 132 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 Y_RNA.721-201ENST00000517207 102 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 SNORD114-21-201ENST00000606412 72 ntBASIC0.93□□□□□ -2.26
RPUSD3Q6P087 MIR6515-201ENST00000619843 57 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms