Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNA5SP257-201ENST00000363023 116 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 Y_RNA.330-201ENST00000365230 109 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 AC117470.1-201ENST00000381974 330 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 Y_RNA.384-201ENST00000383909 102 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 Y_RNA.496-201ENST00000384444 101 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 MIR520C-201ENST00000385005 87 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 MIR136-201ENST00000385207 82 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 AL590004.1-201ENST00000405321 300 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 RNA5SP127-201ENST00000411051 133 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 SNRPGP10-201ENST00000432323 225 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 HMGN1P33-201ENST00000432945 451 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.6□□□□□ -2.31
CXCL12P48061 PSMC1P5-201ENST00000512850 177 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 RNA5SP121-201ENST00000516537 101 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 SNORD116.3-201ENST00000517176 78 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 UBE2V2P2-201ENST00000587677 504 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 AC104985.2-201ENST00000620598 500 ntBASIC0.6□□□□□ -2.31
CXCL12P48061 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
CXCL12P48061 MIR103A2-201ENST00000362154 78 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 SNORD81.1-201ENST00000363064 77 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 Y_RNA.428-201ENST00000384078 102 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 RNU6-131P-201ENST00000391144 107 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 RPS3AP1-201ENST00000413190 320 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.59□□□□□ -2.31
CXCL12P48061 AC005042.3-201ENST00000453230 174 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 Y_RNA.632-201ENST00000459189 102 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 AC082651.2-201ENST00000496833 166 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 AC091951.2-201ENST00000500762 203 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 RNU6-197P-201ENST00000516680 100 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.59□□□□□ -2.31
CXCL12P48061 AP003716.2-201ENST00000528260 108 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 AC023827.1-201ENST00000569247 97 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 AL355375.2-201ENST00000574825 175 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 MIR4764-201ENST00000580680 88 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 MIR4423-201ENST00000580922 80 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 DEFB117-201ENST00000602356 141 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 RBM11P1-201ENST00000604951 799 ntBASIC0.59□□□□□ -2.31
CXCL12P48061 SNORA72.1-201ENST00000363485 129 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 snoU2-30.1-201ENST00000365012 70 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 Y_RNA.310-201ENST00000365063 113 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 Y_RNA.331-201ENST00000365267 102 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 Y_RNA.341-201ENST00000365341 102 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 SNORD14.1-201ENST00000365609 90 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 MIR605-201ENST00000385078 83 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 MIR1185-1-201ENST00000408598 86 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.58□□□□□ -2.32
CXCL12P48061 SNORD123-201ENST00000459473 70 ntBASIC0.58□□□□□ -2.32
CXCL12P48061 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.58□□□□□ -2.32
CXCL12P48061 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CXCL12P48061 RNU6-1115P-201ENST00000362490 106 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 Y_RNA.187-201ENST00000363918 113 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 Y_RNA.303-201ENST00000364998 94 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 Y_RNA.368-201ENST00000365547 113 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 RNU6-1323P-201ENST00000384025 107 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 Y_RNA.458-201ENST00000384240 102 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 MIR100-201ENST00000385259 80 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 RNU6-710P-201ENST00000410424 105 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 MTCO2P27-201ENST00000420740 428 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 Y_RNA.661-201ENST00000516003 99 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 RNA5SP255-201ENST00000516370 107 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 RNU4-77P-201ENST00000516692 156 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 AC136628.3-201ENST00000521868 290 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 MIR5188-201ENST00000583467 113 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 POLR3GP1-201ENST00000594073 261 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.57□□□□□ -2.32
CXCL12P48061 AC092447.9-201ENST00000603395 144 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 AC122108.2-201ENST00000611946 526 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 AC010205.1-201ENST00000616668 449 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 SEPT14P17-201ENST00000617978 177 ntBASIC0.57□□□□□ -2.32
CXCL12P48061 Y_RNA.80-201ENST00000362996 102 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 Y_RNA.485-201ENST00000384395 102 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 AC006461.1-201ENST00000412637 326 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 AF228730.4-201ENST00000421457 183 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 MTND1P14-201ENST00000427400 950 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 HMGN2P32-201ENST00000444648 269 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 RNU7-152P-201ENST00000458982 64 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 U8.19-201ENST00000459095 133 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 SNORD19B-201ENST00000459623 84 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 RN7SKP164-201ENST00000516138 266 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 RNU7-110P-201ENST00000516891 62 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 AC024405.2-202ENST00000532731 184 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 MIR3145-201ENST00000580727 82 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 AC131055.1-201ENST00000584626 316 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
CXCL12P48061 Y_RNA.148-201ENST00000363557 117 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 Y_RNA.203-201ENST00000364106 102 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 U8.7-201ENST00000364940 136 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 RNU6-1335P-201ENST00000365426 107 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 Y_RNA.456-201ENST00000384232 111 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 RNU6-937P-201ENST00000384325 106 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 Y_RNA.529-201ENST00000384586 119 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 RNU4-30P-201ENST00000410245 143 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 AL035398.1-201ENST00000430869 322 ntBASIC0.55□□□□□ -2.32
CXCL12P48061 AC010655.3-201ENST00000478818 450 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms