Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 AC091925.1-201ENST00000623204 462 ntBASIC0.46□□□□□ -2.34
RAB3DO95716 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
RAB3DO95716 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
RAB3DO95716 MIR373-201ENST00000362273 69 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 Y_RNA.384-201ENST00000383909 102 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 RNY1P8-201ENST00000383970 114 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 MIR802-201ENST00000390235 94 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 SNORD72-201ENST00000390994 80 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 MIR1827-201ENST00000408549 66 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 RNU6-613P-201ENST00000410412 108 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 Y_RNA.632-201ENST00000459189 102 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 Y_RNA.661-201ENST00000516003 99 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 RNU4-77P-201ENST00000516692 156 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.45□□□□□ -2.34
RAB3DO95716 AC004812.1-201ENST00000540773 146 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
RAB3DO95716 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.44□□□□□ -2.34
RAB3DO95716 RNU6-1115P-201ENST00000362490 106 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 Y_RNA.143-201ENST00000363520 106 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 Y_RNA.462-201ENST00000384268 102 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 SNORD105-201ENST00000386910 85 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 MTCO2P33-201ENST00000402100 465 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 AL603910.2-201ENST00000407268 136 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.44□□□□□ -2.34
RAB3DO95716 RNU7-141P-201ENST00000459304 62 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 snoU13.21-201ENST00000459368 105 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.44□□□□□ -2.34
RAB3DO95716 RNU6-830P-201ENST00000516353 107 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 RPL23AP91-201ENST00000569211 455 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 AC008507.4-201ENST00000585464 127 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 SNORD58B-201ENST00000607313 66 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 AC015726.2-201ENST00000620112 122 ntBASIC0.44□□□□□ -2.34
RAB3DO95716 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.44□□□□□ -2.34
RAB3DO95716 Y_RNA.187-201ENST00000363918 113 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 Y_RNA.286-201ENST00000364813 102 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RAB3DO95716 SNORA51.10-201ENST00000384418 136 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 Y_RNA.551-201ENST00000384661 102 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 RNU6-1067P-201ENST00000384752 107 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 SNORA36B-201ENST00000410438 131 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 snoU13.23-201ENST00000458863 104 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 DEFB108E-201ENST00000524692 240 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 AC015712.3-201ENST00000559380 164 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.43□□□□□ -2.34
RAB3DO95716 AC087685.1-201ENST00000587507 141 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 MIR4791-201ENST00000607666 84 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 AL136317.1-201ENST00000612653 226 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 AC007742.2-201ENST00000618226 398 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 MTND1P7-201ENST00000632801 297 ntBASIC0.43□□□□□ -2.34
RAB3DO95716 MIR1-1-201ENST00000362147 71 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RNU6-369P-201ENST00000362515 102 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RNU4-80P-201ENST00000363200 141 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 SNORD45.3-201ENST00000363836 72 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RNU6-801P-201ENST00000364087 105 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RNU6-1283P-201ENST00000365314 105 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 AC024067.1-201ENST00000426199 223 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 AC015818.7-201ENST00000428754 109 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 AL160004.2-201ENST00000432935 350 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 AC087499.7-201ENST00000441958 109 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RNU7-152P-201ENST00000458982 64 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RNU6-437P-201ENST00000459408 95 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 MIR2115-201ENST00000516657 100 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.42□□□□□ -2.34
RAB3DO95716 UBE2V2P2-201ENST00000587677 504 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 RPS29P30-201ENST00000600975 111 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 AL080274.1-201ENST00000605565 220 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 AL121655.1-201ENST00000605811 308 ntBASIC0.42□□□□□ -2.34
RAB3DO95716 Y_RNA.5-201ENST00000362334 102 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 Y_RNA.39-201ENST00000362620 98 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 Y_RNA.140-201ENST00000363474 103 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 Y_RNA.168-201ENST00000363740 102 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 RNU4-50P-201ENST00000364361 141 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 RNU6-396P-201ENST00000365369 105 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 Y_RNA.370-201ENST00000365589 108 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 Y_RNA.383-201ENST00000383855 97 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 Y_RNA.439-201ENST00000384119 94 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 RNU6-21P-201ENST00000384710 107 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 RNU6-205P-201ENST00000390858 107 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 SNORA26.5-201ENST00000391215 123 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.41□□□□□ -2.34
RAB3DO95716 SNORD19B-201ENST00000459623 84 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 AC133485.1-201ENST00000567176 124 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 AC138907.6-201ENST00000568401 126 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 AC005357.1-201ENST00000588399 301 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 AC104695.3-201ENST00000604052 296 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 AL606534.2-204ENST00000635008 178 ntBASIC0.41□□□□□ -2.34
RAB3DO95716 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
RAB3DO95716 SNORA72.4-201ENST00000384174 132 ntBASIC0.4□□□□□ -2.35
RAB3DO95716 SNORD63-201ENST00000384262 68 ntBASIC0.4□□□□□ -2.35
RAB3DO95716 RNU6-130P-201ENST00000411112 103 ntBASIC0.4□□□□□ -2.35
RAB3DO95716 SNORD11-201ENST00000459124 84 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms