Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 U8.7-201ENST00000364940 136 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-144P-201ENST00000383951 107 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 SNORA8.3-201ENST00000384679 139 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-417P-201ENST00000384712 107 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 SNORA48.1-201ENST00000390879 135 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 RNA5SP511-201ENST00000410487 115 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 HMGN2P23-201ENST00000456759 269 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 RNA5SP458-201ENST00000516188 119 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 RNVU1-2-201ENST00000516326 135 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 AL353149.1-201ENST00000610667 244 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 U6.73-201ENST00000619194 103 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 MTND1P7-201ENST00000632801 297 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 AC068647.2-201ENST00000637380 353 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 AC132825.6-201ENST00000638861 357 ntBASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-804P-201ENST00000384286 107 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 SNORA19-201ENST00000384737 128 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR526A2-201ENST00000390198 65 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-381P-201ENST00000391259 108 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 RNA5SP467-201ENST00000391274 118 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 AC010154.1-201ENST00000425857 269 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 AC099677.2-201ENST00000436385 175 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 AC117454.1-201ENST00000491120 168 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU7-115P-201ENST00000516433 55 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 AC104465.1-201ENST00000611365 139 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.182-201ENST00000363880 111 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.293-201ENST00000364908 93 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU6-275P-201ENST00000364910 107 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.412-201ENST00000384001 104 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU2-2P-201ENST00000410396 191 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 EBAG9P1-201ENST00000418955 543 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 RPL36AP21-201ENST00000490372 323 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.797-201ENST00000515977 94 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 AC069114.2-201ENST00000604699 304 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 RNU2-4P-201ENST00000606190 192 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 MIR548AY-201ENST00000617669 107 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.97□□□□□ -2.09
NCKIPSDQ9NZQ3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.96□□□□□ -2.09
NCKIPSDQ9NZQ3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 Y_RNA.8-201ENST00000362353 102 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-1205P-201ENST00000363625 106 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-704P-201ENST00000364162 103 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU4-84P-201ENST00000364200 139 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 SNORD113-1-201ENST00000365321 69 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 Y_RNA.398-201ENST00000383952 99 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-136P-201ENST00000384663 107 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNA5SP323-201ENST00000391094 133 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU5E-9P-201ENST00000411164 104 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 CST2P1-201ENST00000425770 87 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 AL162725.1-201ENST00000435405 301 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU7-172P-201ENST00000517125 64 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR4744-201ENST00000581563 82 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 AP003357.1-201ENST00000604497 148 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 AP001485.1-201ENST00000604799 199 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.96□□□□□ -2.1
NCKIPSDQ9NZQ3 RNA5SP99-201ENST00000364020 114 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 snoU2_19.4-201ENST00000364329 80 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-449P-201ENST00000383914 107 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR616-201ENST00000385293 97 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 HSPE1P21-201ENST00000438283 308 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AL603825.1-201ENST00000438481 80 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 RPS4XP11-201ENST00000446897 772 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 MTND5P41-201ENST00000517498 206 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AC127455.1-201ENST00000565496 145 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AC073413.2-201ENST00000604332 360 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AC005972.2-201ENST00000604690 348 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 AL391903.3-201ENST00000612158 163 ntBASIC1.95□□□□□ -2.1
NCKIPSDQ9NZQ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-1323P-201ENST00000384025 107 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR515-2-201ENST00000384883 83 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR515-1-201ENST00000384884 83 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms