Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 Y_RNA.456-201ENST00000384232 111 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 SNORD99-201ENST00000408612 74 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 MIR1302-7-201ENST00000408841 72 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.57□□□□□ -2.32
UFD1Q92890 AC004941.2-201ENST00000427009 228 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 RNU6-1110P-201ENST00000516462 101 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.57□□□□□ -2.32
UFD1Q92890 AP003357.1-201ENST00000604497 148 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 AL355073.2-201ENST00000612106 557 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 7SK.10-201ENST00000621414 298 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 MIR4251-201ENST00000635819 61 ntBASIC0.57□□□□□ -2.32
UFD1Q92890 Y_RNA.148-201ENST00000363557 117 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 Y_RNA.203-201ENST00000364106 102 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 Y_RNA.387-201ENST00000383918 102 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 SNORD38C-201ENST00000384381 69 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 Y_RNA.505-201ENST00000384489 102 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 SNORD116-29-201ENST00000384516 83 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 RNY4P36-201ENST00000391116 96 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 AL590004.1-201ENST00000405321 300 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 SNORD111-201ENST00000408139 94 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.56□□□□□ -2.32
UFD1Q92890 AC067940.1-201ENST00000458411 300 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 AC091951.2-201ENST00000500762 203 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 RNU6-1053P-201ENST00000515930 101 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 SNORA20.3-201ENST00000516880 132 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 AC024405.2-202ENST00000532731 184 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 AC093027.1-201ENST00000546698 429 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.56□□□□□ -2.32
UFD1Q92890 JPX_2.1-201ENST00000614161 69 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 AC010205.1-201ENST00000616668 449 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 AC007742.2-201ENST00000618226 398 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 MIR4272-201ENST00000635924 64 ntBASIC0.56□□□□□ -2.32
UFD1Q92890 MIR337-201ENST00000362281 93 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 Y_RNA.331-201ENST00000365267 102 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 SNORD28B-201ENST00000390993 75 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 RNU6-994P-201ENST00000410507 111 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 AC138393.2-201ENST00000414742 246 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 AC098869.1-201ENST00000481627 292 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.55□□□□□ -2.32
UFD1Q92890 RNU6-277P-201ENST00000516272 106 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 MIR4498-201ENST00000577599 66 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 MIR548AR-201ENST00000582191 57 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 AC005730.3-201ENST00000583067 366 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 AC087685.1-201ENST00000587507 141 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 DEFB117-201ENST00000602356 141 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
UFD1Q92890 RNU6-654P-201ENST00000364373 107 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 SNORD113.3-201ENST00000364630 78 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 RNU6-392P-201ENST00000364926 101 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 Y_RNA.428-201ENST00000384078 102 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 Y_RNA.462-201ENST00000384268 102 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 Y_RNA.463-201ENST00000384271 102 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 MTCO2P27-201ENST00000420740 428 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 AF228730.4-201ENST00000421457 183 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 AC024067.1-201ENST00000426199 223 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 RPL23AP54-201ENST00000495129 419 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 RNU6-237P-201ENST00000515985 71 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 RNU6-113P-201ENST00000516653 101 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 Y_RNA.718-201ENST00000517110 102 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 SNORD116.3-201ENST00000517176 78 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 AC127455.1-201ENST00000565496 145 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 AL590095.2-201ENST00000604136 117 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 AL136317.1-201ENST00000612653 226 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 MIR6516-201ENST00000630554 81 ntBASIC0.54□□□□□ -2.32
UFD1Q92890 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
UFD1Q92890 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
UFD1Q92890 SNORD81.1-201ENST00000363064 77 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 Y_RNA.142-201ENST00000363491 102 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 RNU6-442P-201ENST00000383968 104 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 SNRPGP14-201ENST00000435400 219 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 RNU7-115P-201ENST00000516433 55 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 MIR5188-201ENST00000583467 113 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 Y_RNA.772-201ENST00000606692 102 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 MIR548AY-201ENST00000617669 107 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 AC099654.14-201ENST00000638599 341 ntBASIC0.53□□□□□ -2.32
UFD1Q92890 RNU6-1209P-201ENST00000363655 107 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 Y_RNA.796-201ENST00000364268 102 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 U8.7-201ENST00000364940 136 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 Y_RNA.799-201ENST00000364992 102 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 Y_RNA.370-201ENST00000365589 108 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 Y_RNA.384-201ENST00000383909 102 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 MIR802-201ENST00000390235 94 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 RNU6-613P-201ENST00000410412 108 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 RNU6-321P-201ENST00000410912 106 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 AC005534.2-201ENST00000431047 433 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.52□□□□□ -2.33
UFD1Q92890 NDUFA4P2-201ENST00000489989 244 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 RNU6-830P-201ENST00000516353 107 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 AC011373.1-201ENST00000607270 237 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 Pinc.1-201ENST00000616452 154 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 AC091925.1-201ENST00000623204 462 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 MIR1302-1-201ENST00000637932 143 ntBASIC0.52□□□□□ -2.33
UFD1Q92890 RNY1P10-201ENST00000363268 113 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
UFD1Q92890 SNORA2B-201ENST00000384583 137 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 RNU6-1067P-201ENST00000384752 107 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms