Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 U4.5-201ENST00000617137 123 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 AC007742.2-201ENST00000618226 398 ntBASIC0.22□□□□□ -2.37
CTLA4P16410 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.21□□□□□ -2.38
CTLA4P16410 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 RNU6-369P-201ENST00000362515 102 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 SNORD14E-201ENST00000364009 85 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 RNU6-580P-201ENST00000365159 107 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 RNY1P8-201ENST00000383970 114 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 Y_RNA.453-201ENST00000384223 109 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 SNORD38C-201ENST00000384381 69 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 MIR573-201ENST00000384964 99 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 SNORD28B-201ENST00000390993 75 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 RNA5SP95-201ENST00000410319 137 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 MTND3P8-201ENST00000412909 339 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.21□□□□□ -2.38
CTLA4P16410 Z83846.1-201ENST00000446798 265 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 FCF1P4-201ENST00000448326 183 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 AC107399.1-201ENST00000451226 265 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 EIF1P4-201ENST00000572664 335 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 AC087685.1-201ENST00000587507 141 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 PISRT1.1-201ENST00000616930 107 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 MIR3688-2-201ENST00000636963 87 ntBASIC0.21□□□□□ -2.38
CTLA4P16410 RNU6-99P-201ENST00000364721 107 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 RNU4-45P-201ENST00000365469 141 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 Y_RNA.376-201ENST00000365638 108 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 RNU6-1323P-201ENST00000384025 107 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 Y_RNA.446-201ENST00000384178 104 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 MIR216A-201ENST00000385063 110 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 MIR518E-201ENST00000385252 88 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 MT-TN-201ENST00000387400 73 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 SNORA69.1-201ENST00000390904 137 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 RNU6-192P-201ENST00000391253 100 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 Y_RNA.592-201ENST00000410274 109 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.2□□□□□ -2.38
CTLA4P16410 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.2□□□□□ -2.38
CTLA4P16410 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.2□□□□□ -2.38
CTLA4P16410 AC012433.1-201ENST00000588916 398 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 AC005176.2-201ENST00000596933 147 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 AC087588.2-201ENST00000617667 426 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 AC015726.2-201ENST00000620112 122 ntBASIC0.2□□□□□ -2.38
CTLA4P16410 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CTLA4P16410 MIR377-201ENST00000362145 69 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 Y_RNA.88-201ENST00000363029 99 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 RNU6-324P-201ENST00000363957 106 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 RNU6-926P-201ENST00000384075 107 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 Y_RNA.537-201ENST00000384626 109 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 Y_RNA.577-201ENST00000384794 101 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 MIR625-201ENST00000385047 85 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 MTCO2P27-201ENST00000420740 428 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.19□□□□□ -2.38
CTLA4P16410 Pinc.1-201ENST00000616452 154 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 AL589743.1-201ENST00000551932 2712 ntBASIC0.19□□□□□ -2.38
CTLA4P16410 MIR18A-201ENST00000362310 71 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU6-626P-201ENST00000363354 107 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU6-442P-201ENST00000383968 104 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU6-20P-201ENST00000384106 107 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNY3P4-201ENST00000384428 101 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 SNORA75.4-201ENST00000391278 119 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 U8.17-201ENST00000391292 132 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU6-710P-201ENST00000410424 105 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 SNRPGP14-201ENST00000435400 219 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.18□□□□□ -2.38
CTLA4P16410 AC093534.1-201ENST00000504977 132 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU6-155P-201ENST00000516347 100 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU6-720P-201ENST00000516363 108 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 RNU7-116P-201ENST00000516940 62 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 MIR6515-201ENST00000619843 57 ntBASIC0.18□□□□□ -2.38
CTLA4P16410 Y_RNA.86-201ENST00000363020 111 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 Y_RNA.146-201ENST00000363549 102 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 Y_RNA.203-201ENST00000364106 102 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 Y_RNA.230-201ENST00000364348 109 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 SNORA51.10-201ENST00000384418 136 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 RNU6-1156P-201ENST00000410365 100 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 MTCO3P10-201ENST00000455912 772 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.17□□□□□ -2.38
CTLA4P16410 AC108740.1-201ENST00000498629 225 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.17□□□□□ -2.38
CTLA4P16410 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.17□□□□□ -2.38
CTLA4P16410 AC022441.3-201ENST00000605737 136 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 AC090517.2-201ENST00000614966 680 ntBASIC0.17□□□□□ -2.38
CTLA4P16410 RNU6-934P-201ENST00000365154 107 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 MIR520F-201ENST00000384824 87 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 MIR570-201ENST00000384917 97 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 MIR520H-201ENST00000385126 88 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 SNORD78.2-201ENST00000391076 69 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 SNORD115-47-201ENST00000391226 86 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 MCFD2P1-201ENST00000417812 300 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 HMGN1P10-201ENST00000474557 553 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 PRDX4P1-201ENST00000507189 574 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 RNU6-977P-201ENST00000516411 103 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 MIR548AO-201ENST00000579992 96 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 POLR3GP1-201ENST00000594073 261 ntBASIC0.16□□□□□ -2.38
CTLA4P16410 Y_RNA.72-201ENST00000362894 103 ntBASIC0.15□□□□□ -2.39
CTLA4P16410 Y_RNA.122-201ENST00000363331 96 ntBASIC0.15□□□□□ -2.39
CTLA4P16410 SNORD45.3-201ENST00000363836 72 ntBASIC0.15□□□□□ -2.39
CTLA4P16410 RNU6-268P-201ENST00000364174 107 ntBASIC0.15□□□□□ -2.39
CTLA4P16410 Y_RNA.329-201ENST00000365209 107 ntBASIC0.15□□□□□ -2.39
CTLA4P16410 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 286.2 ms