Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
GGPS1O95749 SNORD81.1-201ENST00000363064 77 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.112-201ENST00000363250 102 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.341-201ENST00000365341 102 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.368-201ENST00000365547 113 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.439-201ENST00000384119 94 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.456-201ENST00000384232 111 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 SNORD63-201ENST00000384262 68 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.551-201ENST00000384661 102 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 MIR1298-201ENST00000408783 112 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 AC024067.1-201ENST00000426199 223 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 U8.20-201ENST00000459445 131 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 RNU7-110P-201ENST00000516891 62 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 RNU7-116P-201ENST00000516940 62 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.15□□□□□ -2.23
GGPS1O95749 DEFB117-201ENST00000602356 141 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 AL096861.1-201ENST00000610899 123 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 AC006157.1-201ENST00000611750 366 ntBASIC1.15□□□□□ -2.23
GGPS1O95749 Y_RNA.80-201ENST00000362996 102 ntBASIC1.14□□□□□ -2.23
GGPS1O95749 AC117470.1-201ENST00000381974 330 ntBASIC1.14□□□□□ -2.23
GGPS1O95749 Y_RNA.485-201ENST00000384395 102 ntBASIC1.14□□□□□ -2.23
GGPS1O95749 snoU13.18-201ENST00000459483 104 ntBASIC1.14□□□□□ -2.23
GGPS1O95749 AL080274.1-201ENST00000605565 220 ntBASIC1.14□□□□□ -2.23
GGPS1O95749 AL133255.1-201ENST00000606374 441 ntBASIC1.14□□□□□ -2.23
GGPS1O95749 RMST_2.1-201ENST00000617263 136 ntBASIC1.14□□□□□ -2.23
GGPS1O95749 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.14□□□□□ -2.23
GGPS1O95749 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
GGPS1O95749 RNU4-50P-201ENST00000364361 141 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 MIR489-201ENST00000384923 84 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 AL590004.1-201ENST00000405321 300 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 MLLT10P1-201ENST00000418346 262 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 AC063976.4-201ENST00000421971 163 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 RNA5SP220-201ENST00000516298 104 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 SNORD45.4-201ENST00000516629 73 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
GGPS1O95749 AC040926.1-201ENST00000530195 238 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
GGPS1O95749 snoU2-30.1-201ENST00000365012 70 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 Y_RNA.471-201ENST00000384312 102 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 RNU6-937P-201ENST00000384325 106 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 RNU6-131P-201ENST00000391144 107 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 SNRPGP10-201ENST00000432323 225 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 HMGN2P32-201ENST00000444648 269 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 AL117351.2-201ENST00000513571 157 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 Y_RNA.714-201ENST00000517065 90 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 AL391903.3-201ENST00000612158 163 ntBASIC1.12□□□□□ -2.23
GGPS1O95749 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
GGPS1O95749 RNU6-1084P-201ENST00000362498 107 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 Y_RNA.395-201ENST00000383945 109 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 RNU6-21P-201ENST00000384710 107 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR15B-201ENST00000385045 98 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR516B2-201ENST00000385190 85 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR136-201ENST00000385207 82 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR1302-11-201ENST00000408051 138 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR1302-9-201ENST00000408365 138 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR1302-10-201ENST00000408734 138 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 RNU4-30P-201ENST00000410245 143 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MTATP6P23-201ENST00000440153 476 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 AC245047.8-201ENST00000456455 284 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 HMGN1P10-201ENST00000474557 553 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 RNU6-1170P-201ENST00000515974 106 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 AC090142.3-201ENST00000519012 385 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 POLR3GP1-201ENST00000594073 261 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 HSPE1P19-201ENST00000603327 295 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 AP003357.1-201ENST00000604497 148 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR1302-2-201ENST00000607096 138 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 uc_338.22-201ENST00000622722 187 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
GGPS1O95749 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 Y_RNA.143-201ENST00000363520 106 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 SNORD14.1-201ENST00000365609 90 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 RNU6-42P-201ENST00000384165 107 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 snoU13.25-201ENST00000458945 104 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 RPS26P48-201ENST00000491713 339 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 RNU7-115P-201ENST00000516433 55 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 SNORA74.3-201ENST00000517108 154 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 AC024405.2-202ENST00000532731 184 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 AP001094.1-201ENST00000579805 193 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
GGPS1O95749 MIR3192-201ENST00000584920 77 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 PRELID3BP2-201ENST00000605362 201 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 AC007485.1-201ENST00000616755 206 ntBASIC1.1□□□□□ -2.23
GGPS1O95749 SNORD50B-201ENST00000364995 70 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 Y_RNA.431-201ENST00000384086 102 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 RNU6-130P-201ENST00000411112 103 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 AC022028.1-201ENST00000412054 408 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.09□□□□□ -2.23
GGPS1O95749 AC127455.1-201ENST00000565496 145 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.09□□□□□ -2.23
GGPS1O95749 MIR3145-201ENST00000580727 82 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 PART1_1.1-201ENST00000611761 217 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.09□□□□□ -2.23
GGPS1O95749 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms