Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.22□□□□□ -2.37
LSM1O15116 snoU13.21-201ENST00000459368 105 ntBASIC0.22□□□□□ -2.37
LSM1O15116 RPL7P42-201ENST00000481005 679 ntBASIC0.22□□□□□ -2.37
LSM1O15116 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.22□□□□□ -2.37
LSM1O15116 MIR1244-1-201ENST00000612829 85 ntBASIC0.22□□□□□ -2.37
LSM1O15116 MIR1244-3-201ENST00000635744 85 ntBASIC0.22□□□□□ -2.37
LSM1O15116 MIR1244-2-201ENST00000636449 85 ntBASIC0.22□□□□□ -2.37
LSM1O15116 MIR1244-4-202ENST00000636813 85 ntBASIC0.22□□□□□ -2.37
LSM1O15116 RNU4-75P-201ENST00000364621 146 ntBASIC0.21□□□□□ -2.38
LSM1O15116 Y_RNA.376-201ENST00000365638 108 ntBASIC0.21□□□□□ -2.38
LSM1O15116 RNU6-1323P-201ENST00000384025 107 ntBASIC0.21□□□□□ -2.38
LSM1O15116 MIR548F5-201ENST00000408421 86 ntBASIC0.21□□□□□ -2.38
LSM1O15116 RPS3AP52-201ENST00000435639 297 ntBASIC0.21□□□□□ -2.38
LSM1O15116 MTND3P10-201ENST00000450967 341 ntBASIC0.21□□□□□ -2.38
LSM1O15116 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.21□□□□□ -2.38
LSM1O15116 AC093534.1-201ENST00000504977 132 ntBASIC0.21□□□□□ -2.38
LSM1O15116 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.21□□□□□ -2.38
LSM1O15116 Y_RNA.714-201ENST00000517065 90 ntBASIC0.21□□□□□ -2.38
LSM1O15116 MIR548AO-201ENST00000579992 96 ntBASIC0.21□□□□□ -2.38
LSM1O15116 AC005899.2-201ENST00000584353 90 ntBASIC0.21□□□□□ -2.38
LSM1O15116 AC012433.1-201ENST00000588916 398 ntBASIC0.21□□□□□ -2.38
LSM1O15116 AC087588.2-201ENST00000617667 426 ntBASIC0.21□□□□□ -2.38
LSM1O15116 Y_RNA.122-201ENST00000363331 96 ntBASIC0.2□□□□□ -2.38
LSM1O15116 RNU4-24P-201ENST00000364565 139 ntBASIC0.2□□□□□ -2.38
LSM1O15116 Y_RNA.295-201ENST00000364918 102 ntBASIC0.2□□□□□ -2.38
LSM1O15116 Y_RNA.537-201ENST00000384626 109 ntBASIC0.2□□□□□ -2.38
LSM1O15116 MIR520H-201ENST00000385126 88 ntBASIC0.2□□□□□ -2.38
LSM1O15116 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.2□□□□□ -2.38
LSM1O15116 RNU2-13P-201ENST00000515909 113 ntBASIC0.2□□□□□ -2.38
LSM1O15116 MIR3612-201ENST00000579753 87 ntBASIC0.2□□□□□ -2.38
LSM1O15116 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
LSM1O15116 AC087685.1-201ENST00000587507 141 ntBASIC0.2□□□□□ -2.38
LSM1O15116 SNORD44.1-201ENST00000363202 61 ntBASIC0.19□□□□□ -2.38
LSM1O15116 Y_RNA.146-201ENST00000363549 102 ntBASIC0.19□□□□□ -2.38
LSM1O15116 SNORD14E-201ENST00000364009 85 ntBASIC0.19□□□□□ -2.38
LSM1O15116 Y_RNA.446-201ENST00000384178 104 ntBASIC0.19□□□□□ -2.38
LSM1O15116 Y_RNA.482-201ENST00000384377 111 ntBASIC0.19□□□□□ -2.38
LSM1O15116 SNORD38C-201ENST00000384381 69 ntBASIC0.19□□□□□ -2.38
LSM1O15116 RNU6-601P-201ENST00000384540 107 ntBASIC0.19□□□□□ -2.38
LSM1O15116 MIR570-201ENST00000384917 97 ntBASIC0.19□□□□□ -2.38
LSM1O15116 Pinc.1-201ENST00000616452 154 ntBASIC0.19□□□□□ -2.38
LSM1O15116 MIR6515-201ENST00000619843 57 ntBASIC0.19□□□□□ -2.38
LSM1O15116 MIR103A1-201ENST00000362165 78 ntBASIC0.18□□□□□ -2.38
LSM1O15116 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
LSM1O15116 Y_RNA.573-201ENST00000384763 105 ntBASIC0.18□□□□□ -2.38
LSM1O15116 RNU6-192P-201ENST00000391253 100 ntBASIC0.18□□□□□ -2.38
LSM1O15116 U8.17-201ENST00000391292 132 ntBASIC0.18□□□□□ -2.38
LSM1O15116 Y_RNA.592-201ENST00000410274 109 ntBASIC0.18□□□□□ -2.38
LSM1O15116 FCF1P4-201ENST00000448326 183 ntBASIC0.18□□□□□ -2.38
LSM1O15116 MIR2053-201ENST00000459295 91 ntBASIC0.18□□□□□ -2.38
LSM1O15116 HMGN1P10-201ENST00000474557 553 ntBASIC0.18□□□□□ -2.38
LSM1O15116 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.18□□□□□ -2.38
LSM1O15116 MIR4804-201ENST00000581683 73 ntBASIC0.18□□□□□ -2.38
LSM1O15116 AC007742.2-201ENST00000618226 398 ntBASIC0.18□□□□□ -2.38
LSM1O15116 MTND1P7-201ENST00000632801 297 ntBASIC0.18□□□□□ -2.38
LSM1O15116 RNU6-99P-201ENST00000364721 107 ntBASIC0.17□□□□□ -2.38
LSM1O15116 SNORD116-2-201ENST00000384274 95 ntBASIC0.17□□□□□ -2.38
LSM1O15116 RNY3P4-201ENST00000384428 101 ntBASIC0.17□□□□□ -2.38
LSM1O15116 SNORD116-6-201ENST00000384711 96 ntBASIC0.17□□□□□ -2.38
LSM1O15116 MIR520F-201ENST00000384824 87 ntBASIC0.17□□□□□ -2.38
LSM1O15116 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
LSM1O15116 snoU13.18-201ENST00000459483 104 ntBASIC0.17□□□□□ -2.38
LSM1O15116 NDUFA4P2-201ENST00000489989 244 ntBASIC0.17□□□□□ -2.38
LSM1O15116 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.17□□□□□ -2.38
LSM1O15116 EIF1P4-201ENST00000572664 335 ntBASIC0.17□□□□□ -2.38
LSM1O15116 AC005176.2-201ENST00000596933 147 ntBASIC0.17□□□□□ -2.38
LSM1O15116 AC048344.4-201ENST00000619744 527 ntBASIC0.17□□□□□ -2.38
LSM1O15116 Y_RNA.88-201ENST00000363029 99 ntBASIC0.16□□□□□ -2.38
LSM1O15116 SNORD114-23-201ENST00000363536 72 ntBASIC0.16□□□□□ -2.38
LSM1O15116 RNU6-268P-201ENST00000364174 107 ntBASIC0.16□□□□□ -2.38
LSM1O15116 Y_RNA.310-201ENST00000365063 113 ntBASIC0.16□□□□□ -2.38
LSM1O15116 RNU6-934P-201ENST00000365154 107 ntBASIC0.16□□□□□ -2.38
LSM1O15116 RNU6-442P-201ENST00000383968 104 ntBASIC0.16□□□□□ -2.38
LSM1O15116 RNU6-20P-201ENST00000384106 107 ntBASIC0.16□□□□□ -2.38
LSM1O15116 SNORA51.10-201ENST00000384418 136 ntBASIC0.16□□□□□ -2.38
LSM1O15116 RNU6-125P-201ENST00000384505 107 ntBASIC0.16□□□□□ -2.38
LSM1O15116 RNU6-510P-201ENST00000391239 108 ntBASIC0.16□□□□□ -2.38
LSM1O15116 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.16□□□□□ -2.38
LSM1O15116 RNU7-56P-201ENST00000458744 62 ntBASIC0.16□□□□□ -2.38
LSM1O15116 LARP7P1-201ENST00000605576 316 ntBASIC0.16□□□□□ -2.38
LSM1O15116 AC022441.3-201ENST00000605737 136 ntBASIC0.16□□□□□ -2.38
LSM1O15116 MIR4791-201ENST00000607666 84 ntBASIC0.16□□□□□ -2.38
LSM1O15116 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
LSM1O15116 AC092634.7-201ENST00000621022 103 ntBASIC0.16□□□□□ -2.38
LSM1O15116 MIR3688-2-201ENST00000636963 87 ntBASIC0.16□□□□□ -2.38
LSM1O15116 Y_RNA.72-201ENST00000362894 103 ntBASIC0.15□□□□□ -2.39
LSM1O15116 Y_RNA.203-201ENST00000364106 102 ntBASIC0.15□□□□□ -2.39
LSM1O15116 RNU6-926P-201ENST00000384075 107 ntBASIC0.15□□□□□ -2.39
LSM1O15116 Y_RNA.577-201ENST00000384794 101 ntBASIC0.15□□□□□ -2.39
LSM1O15116 MIR598-201ENST00000384868 97 ntBASIC0.15□□□□□ -2.39
LSM1O15116 MIR518A1-201ENST00000385068 85 ntBASIC0.15□□□□□ -2.39
LSM1O15116 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
LSM1O15116 SNORD83.1-201ENST00000411362 77 ntBASIC0.15□□□□□ -2.39
LSM1O15116 MTND3P8-201ENST00000412909 339 ntBASIC0.15□□□□□ -2.39
LSM1O15116 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.15□□□□□ -2.39
LSM1O15116 RNU6-155P-201ENST00000516347 100 ntBASIC0.15□□□□□ -2.39
LSM1O15116 RNU6-977P-201ENST00000516411 103 ntBASIC0.15□□□□□ -2.39
LSM1O15116 RNU7-116P-201ENST00000516940 62 ntBASIC0.15□□□□□ -2.39
LSM1O15116 MIR4264-201ENST00000583520 66 ntBASIC0.15□□□□□ -2.39
LSM1O15116 AP003357.1-201ENST00000604497 148 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms