Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hmg20bQ9Z104 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hmg20bQ9Z104 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hmg20bQ9Z104 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.91■□□□□ 0.62
Hmg20bQ9Z104 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Mir3081-201ENSMUST00000175305 84 ntBASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Gm33142-201ENSMUST00000193913 867 ntBASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hmg20bQ9Z104 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Hmg20bQ9Z104 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmg20bQ9Z104 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmg20bQ9Z104 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmg20bQ9Z104 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hmg20bQ9Z104 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Rprl3-201ENSMUST00000157400 290 ntBASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Gm27704-201ENSMUST00000185094 107 ntBASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hmg20bQ9Z104 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hmg20bQ9Z104 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms