Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cx3cr1Q9Z0D9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cx3cr1Q9Z0D9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm5643-201ENSMUST00000117081 966 ntBASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm37856-201ENSMUST00000191634 999 ntBASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm18115-201ENSMUST00000221209 621 ntBASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cx3cr1Q9Z0D9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cx3cr1Q9Z0D9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms