Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.06□□□□□ -0.16
Nubp1Q9R060 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC14.06□□□□□ -0.16
Nubp1Q9R060 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.06□□□□□ -0.16
Nubp1Q9R060 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.05□□□□□ -0.16
Nubp1Q9R060 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.05□□□□□ -0.16
Nubp1Q9R060 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.05□□□□□ -0.16
Nubp1Q9R060 Gm44872-201ENSMUST00000207864 420 ntBASIC14.05□□□□□ -0.16
Nubp1Q9R060 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.05□□□□□ -0.16
Nubp1Q9R060 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nubp1Q9R060 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gm7222-201ENSMUST00000117512 906 ntBASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gm25745-201ENSMUST00000174945 133 ntBASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.04□□□□□ -0.16
Nubp1Q9R060 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.04□□□□□ -0.16
Nubp1Q9R060 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nubp1Q9R060 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nubp1Q9R060 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms