Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn11aQ9R053 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.89■□□□□ 0.61
Scn11aQ9R053 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Gm17968-201ENSMUST00000194902 784 ntBASIC18.89■□□□□ 0.61
Scn11aQ9R053 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.89■□□□□ 0.61
Scn11aQ9R053 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Scn11aQ9R053 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Gm18489-201ENSMUST00000172565 551 ntBASIC18.88■□□□□ 0.61
Scn11aQ9R053 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn11aQ9R053 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.88■□□□□ 0.61
Scn11aQ9R053 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Mir8117-201ENSMUST00000184773 107 ntBASIC18.88■□□□□ 0.61
Scn11aQ9R053 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.88■□□□□ 0.61
Scn11aQ9R053 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.88■□□□□ 0.61
Scn11aQ9R053 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.88■□□□□ 0.61
Scn11aQ9R053 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn11aQ9R053 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.87■□□□□ 0.61
Scn11aQ9R053 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Scn11aQ9R053 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.86■□□□□ 0.61
Scn11aQ9R053 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Gm7787-201ENSMUST00000216858 688 ntBASIC18.86■□□□□ 0.61
Scn11aQ9R053 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.86■□□□□ 0.61
Scn11aQ9R053 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.86■□□□□ 0.61
Scn11aQ9R053 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn11aQ9R053 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scn11aQ9R053 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.85■□□□□ 0.61
Scn11aQ9R053 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.85■□□□□ 0.61
Scn11aQ9R053 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn11aQ9R053 Gm5177-201ENSMUST00000183092 997 ntBASIC18.85■□□□□ 0.61
Scn11aQ9R053 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms