Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Gm4459-201ENSMUST00000118750 468 ntBASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Gm9172-201ENSMUST00000212092 954 ntBASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Dancr-204ENSMUST00000132389 2347 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44357-201ENSMUST00000195897 142 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm19658-201ENSMUST00000196231 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44367-201ENSMUST00000196836 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44350-201ENSMUST00000197197 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44390-201ENSMUST00000197533 144 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44313-201ENSMUST00000198018 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44486-201ENSMUST00000198508 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44314-201ENSMUST00000199263 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44394-201ENSMUST00000199558 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44484-201ENSMUST00000199873 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44466-201ENSMUST00000200264 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gm44359-201ENSMUST00000200671 138 ntBASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rfx5Q9JL61 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rfx5Q9JL61 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rfx5Q9JL61 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms