Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13□□□□□ -0.33
Rhox4bQ9JI43 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Gm15375-201ENSMUST00000119510 849 ntBASIC13□□□□□ -0.33
Rhox4bQ9JI43 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13□□□□□ -0.33
Rhox4bQ9JI43 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rhox4bQ9JI43 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rhox4bQ9JI43 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms