Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Mir6349-201ENSMUST00000184059 97 ntBASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Gm10138-203ENSMUST00000206952 366 ntBASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ube4bQ9ES00 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Gm12896-201ENSMUST00000118430 226 ntBASIC15.47■□□□□ 0.07
Ube4bQ9ES00 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ube4bQ9ES00 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Mtag2-201ENSMUST00000058665 714 ntBASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ube4bQ9ES00 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ube4bQ9ES00 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ube4bQ9ES00 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms