Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rrp8Q9DB85 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.67■□□□□ 0.1
Rrp8Q9DB85 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.67■□□□□ 0.1
Rrp8Q9DB85 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Rrp8Q9DB85 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Gm11764-201ENSMUST00000120221 623 ntBASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Gm26308-201ENSMUST00000157768 69 ntBASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Mir8117-201ENSMUST00000184773 107 ntBASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.66■□□□□ 0.1
Rrp8Q9DB85 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Gm27646-201ENSMUST00000183989 110 ntBASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp8Q9DB85 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp8Q9DB85 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp8Q9DB85 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp8Q9DB85 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rrp8Q9DB85 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp8Q9DB85 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms