Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.15■□□□□ 0.34
Mms19Q9D071 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.15■□□□□ 0.34
Mms19Q9D071 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Haglr-201ENSMUST00000100000 2085 ntBASIC17.15■□□□□ 0.34
Mms19Q9D071 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Mms19Q9D071 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mms19Q9D071 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.14■□□□□ 0.33
Mms19Q9D071 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Mms19Q9D071 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.14■□□□□ 0.33
Mms19Q9D071 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.14■□□□□ 0.33
Mms19Q9D071 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Mms19Q9D071 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.14■□□□□ 0.33
Mms19Q9D071 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Mms19Q9D071 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Mms19Q9D071 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mms19Q9D071 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Mms19Q9D071 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.13■□□□□ 0.33
Mms19Q9D071 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mms19Q9D071 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.13■□□□□ 0.33
Mms19Q9D071 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.13■□□□□ 0.33
Mms19Q9D071 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Mms19Q9D071 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Mms19Q9D071 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Mms19Q9D071 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.13■□□□□ 0.33
Mms19Q9D071 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mms19Q9D071 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mms19Q9D071 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mms19Q9D071 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mms19Q9D071 Gm7153-201ENSMUST00000117092 455 ntBASIC17.11■□□□□ 0.33
Mms19Q9D071 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.11■□□□□ 0.33
Mms19Q9D071 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mms19Q9D071 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms