Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hdhd3Q9CYW4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdhd3Q9CYW4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hdhd3Q9CYW4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hdhd3Q9CYW4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Gm18666-201ENSMUST00000190039 958 ntBASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Gm10602-201ENSMUST00000098239 609 ntBASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hdhd3Q9CYW4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hdhd3Q9CYW4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hdhd3Q9CYW4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Hdhd3Q9CYW4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hdhd3Q9CYW4 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.08□□□□□ -0.31
Hdhd3Q9CYW4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hdhd3Q9CYW4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdhd3Q9CYW4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hdhd3Q9CYW4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms