Protein–RNA interactions for Protein: Q9CX11

Utp23, rRNA-processing protein UTP23 homolog, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Utp23Q9CX11 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Rps4l-201ENSMUST00000071745 943 ntBASIC14.31□□□□□ -0.12
Utp23Q9CX11 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Utp23Q9CX11 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.3□□□□□ -0.12
Utp23Q9CX11 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.3□□□□□ -0.12
Utp23Q9CX11 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.3□□□□□ -0.12
Utp23Q9CX11 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Utp23Q9CX11 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Utp23Q9CX11 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Gm13312-201ENSMUST00000119631 718 ntBASIC14.29□□□□□ -0.12
Utp23Q9CX11 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.29□□□□□ -0.12
Utp23Q9CX11 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.29□□□□□ -0.12
Utp23Q9CX11 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Utp23Q9CX11 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.29□□□□□ -0.12
Utp23Q9CX11 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.29□□□□□ -0.12
Utp23Q9CX11 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.28□□□□□ -0.12
Utp23Q9CX11 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.28□□□□□ -0.12
Utp23Q9CX11 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.28□□□□□ -0.12
Utp23Q9CX11 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.28□□□□□ -0.12
Utp23Q9CX11 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.28□□□□□ -0.12
Utp23Q9CX11 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Utp23Q9CX11 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms