Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf135Q9CWS1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.73■□□□□ 0.27
Rnf135Q9CWS1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf135Q9CWS1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf135Q9CWS1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf135Q9CWS1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf135Q9CWS1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf135Q9CWS1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Gm21559-201ENSMUST00000220638 855 ntBASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Gm8587-201ENSMUST00000076538 843 ntBASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf135Q9CWS1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rnf135Q9CWS1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 App-207ENSMUST00000227737 2827 ntBASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf135Q9CWS1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Gm5587-201ENSMUST00000206270 674 ntBASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf135Q9CWS1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms