Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim34aQ99PP6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Mir3113-201ENSMUST00000175478 76 ntBASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim34aQ99PP6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Mir8117-201ENSMUST00000184773 107 ntBASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Gm37153-201ENSMUST00000193637 231 ntBASIC19.72■□□□□ 0.75
Trim34aQ99PP6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.72■□□□□ 0.75
Trim34aQ99PP6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34aQ99PP6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Gm10175-201ENSMUST00000086013 645 ntBASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.71■□□□□ 0.75
Trim34aQ99PP6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
Trim34aQ99PP6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
Trim34aQ99PP6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34aQ99PP6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34aQ99PP6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34aQ99PP6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim34aQ99PP6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms