Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Gm27357-201ENSMUST00000183754 135 ntBASIC17.22■□□□□ 0.35
Tlr3Q99MB1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tlr3Q99MB1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tlr3Q99MB1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tlr3Q99MB1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tlr3Q99MB1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Tlr3Q99MB1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tlr3Q99MB1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tlr3Q99MB1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tlr3Q99MB1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tlr3Q99MB1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Gm24589-201ENSMUST00000116692 94 ntBASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tlr3Q99MB1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tlr3Q99MB1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms