Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdk5rap3Q99LM2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cdk5rap3Q99LM2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Mir5130-201ENSMUST00000175160 84 ntBASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cdk5rap3Q99LM2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Cdk5rap3Q99LM2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cdk5rap3Q99LM2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdk5rap3Q99LM2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms