Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16■□□□□ 0.15
Cstf1Q99LC2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Gm17271-201ENSMUST00000165535 355 ntBASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.99■□□□□ 0.15
Cstf1Q99LC2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.98■□□□□ 0.15
Cstf1Q99LC2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cstf1Q99LC2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.98■□□□□ 0.15
Cstf1Q99LC2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cstf1Q99LC2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Gm8969-201ENSMUST00000199694 526 ntBASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cstf1Q99LC2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms