Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Gm27646-201ENSMUST00000183989 110 ntBASIC18.44■□□□□ 0.54
Rfc4Q99J62 Gm10576-201ENSMUST00000191927 825 ntBASIC18.44■□□□□ 0.54
Rfc4Q99J62 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rfc4Q99J62 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm8825-201ENSMUST00000182565 998 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm4518-201ENSMUST00000182638 718 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rfc4Q99J62 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.43■□□□□ 0.54
Rfc4Q99J62 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rfc4Q99J62 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rfc4Q99J62 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rfc4Q99J62 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Rfc4Q99J62 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.41■□□□□ 0.54
Rfc4Q99J62 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rfc4Q99J62 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfc4Q99J62 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms