Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thumpd1Q99J36 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 App-207ENSMUST00000227737 2827 ntBASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Gm12527-201ENSMUST00000117967 564 ntBASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Gm11539-201ENSMUST00000119837 557 ntBASIC14.31□□□□□ -0.12
Thumpd1Q99J36 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Odf3b-204ENSMUST00000227834 930 ntBASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thumpd1Q99J36 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.3□□□□□ -0.12
Thumpd1Q99J36 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms