Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha2Q91Y17 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha2Q91Y17 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Gm4459-201ENSMUST00000118750 468 ntBASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Gm43347-201ENSMUST00000200226 580 ntBASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdha2Q91Y17 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdha2Q91Y17 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Gm12497-201ENSMUST00000138778 237 ntBASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Gm6257-201ENSMUST00000163864 910 ntBASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.06■□□□□ 0.32
Pcdha2Q91Y17 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdha2Q91Y17 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms