Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha8Q91Y12 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha8Q91Y12 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha8Q91Y12 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.66■□□□□ 0.1
Pcdha8Q91Y12 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha8Q91Y12 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Gm25016-201ENSMUST00000158399 131 ntBASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Gm6659-201ENSMUST00000174752 547 ntBASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdha8Q91Y12 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Gm6623-201ENSMUST00000173570 544 ntBASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Gm23634-201ENSMUST00000175071 91 ntBASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdha8Q91Y12 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdha8Q91Y12 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdha8Q91Y12 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms