Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm24589-201ENSMUST00000116692 94 ntBASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm13216-201ENSMUST00000117145 591 ntBASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm37002-201ENSMUST00000194560 373 ntBASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm38018-201ENSMUST00000195651 540 ntBASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb20Q91XZ9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb20Q91XZ9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Gm43339-201ENSMUST00000200032 1606 ntBASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Gm34391-201ENSMUST00000203706 907 ntBASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb20Q91XZ9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb20Q91XZ9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms