Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Nudcd3Q8R1N4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Sybu-209ENSMUST00000228639 4113 ntBASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Nudcd3Q8R1N4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Gm18115-201ENSMUST00000221209 621 ntBASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nudcd3Q8R1N4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Mir1199-201ENSMUST00000117015 119 ntBASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nudcd3Q8R1N4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nudcd3Q8R1N4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms