Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afjQ8R1M2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H2afjQ8R1M2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.95□□□□□ -0.02
H2afjQ8R1M2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Gm11539-201ENSMUST00000119837 557 ntBASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Gm16061-201ENSMUST00000122167 857 ntBASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.94□□□□□ -0.02
H2afjQ8R1M2 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.94□□□□□ -0.02
H2afjQ8R1M2 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
H2afjQ8R1M2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Prob1-201ENSMUST00000097619 3021 ntBASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H2afjQ8R1M2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Actl10-202ENSMUST00000226583 1501 ntBASIC14.92□□□□□ -0.02
H2afjQ8R1M2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
H2afjQ8R1M2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Gm13186-201ENSMUST00000118031 316 ntBASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Asic1-205ENSMUST00000228185 1818 ntBASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afjQ8R1M2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms