Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Gm18489-201ENSMUST00000172565 551 ntBASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Mir3113-201ENSMUST00000175478 76 ntBASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vopp1Q8R1C3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vopp1Q8R1C3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Mir8117-201ENSMUST00000184773 107 ntBASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vopp1Q8R1C3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vopp1Q8R1C3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.9■□□□□ 0.3
Vopp1Q8R1C3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vopp1Q8R1C3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vopp1Q8R1C3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vopp1Q8R1C3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vopp1Q8R1C3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms