Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.82■□□□□ 0.12
Treml1Q8K558 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Treml1Q8K558 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Treml1Q8K558 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Gm27357-201ENSMUST00000183754 135 ntBASIC15.82■□□□□ 0.12
Treml1Q8K558 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Treml1Q8K558 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Treml1Q8K558 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.82■□□□□ 0.12
Treml1Q8K558 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Treml1Q8K558 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Treml1Q8K558 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Treml1Q8K558 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Treml1Q8K558 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
Treml1Q8K558 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Treml1Q8K558 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.81■□□□□ 0.12
Treml1Q8K558 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Gm27867-201ENSMUST00000184778 125 ntBASIC15.81■□□□□ 0.12
Treml1Q8K558 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Gm18669-201ENSMUST00000216049 778 ntBASIC15.81■□□□□ 0.12
Treml1Q8K558 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.81■□□□□ 0.12
Treml1Q8K558 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Treml1Q8K558 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.81■□□□□ 0.12
Treml1Q8K558 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.8■□□□□ 0.12
Treml1Q8K558 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Treml1Q8K558 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Treml1Q8K558 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Treml1Q8K558 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Treml1Q8K558 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.79■□□□□ 0.12
Treml1Q8K558 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Treml1Q8K558 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.79■□□□□ 0.12
Treml1Q8K558 Gm13312-201ENSMUST00000119631 718 ntBASIC15.79■□□□□ 0.12
Treml1Q8K558 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Treml1Q8K558 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.79■□□□□ 0.12
Treml1Q8K558 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Treml1Q8K558 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Treml1Q8K558 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Treml1Q8K558 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Treml1Q8K558 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Treml1Q8K558 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms