Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a1Q8K4Z5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a1Q8K4Z5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Gm44454-201ENSMUST00000198541 138 ntBASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a1Q8K4Z5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Gm15372-201ENSMUST00000120729 834 ntBASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Gm12895-201ENSMUST00000122214 226 ntBASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a1Q8K4Z5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a1Q8K4Z5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms