Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.17■□□□□ 0.02
Clrn1Q8K445 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.17■□□□□ 0.02
Clrn1Q8K445 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Clrn1Q8K445 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clrn1Q8K445 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.15■□□□□ 0.02
Clrn1Q8K445 Gm33142-201ENSMUST00000193913 867 ntBASIC15.15■□□□□ 0.02
Clrn1Q8K445 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Clrn1Q8K445 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.15■□□□□ 0.02
Clrn1Q8K445 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.15■□□□□ 0.02
Clrn1Q8K445 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clrn1Q8K445 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.14■□□□□ 0.01
Clrn1Q8K445 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.14■□□□□ 0.01
Clrn1Q8K445 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clrn1Q8K445 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clrn1Q8K445 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms