Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.66■□□□□ 0.26
Prpf39Q8K2Z2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Rprl3-201ENSMUST00000157400 290 ntBASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Mir3081-201ENSMUST00000175305 84 ntBASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf39Q8K2Z2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Prpf39Q8K2Z2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Gm27357-201ENSMUST00000183754 135 ntBASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf39Q8K2Z2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf39Q8K2Z2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.62■□□□□ 0.25
Prpf39Q8K2Z2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms