Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.74■□□□□ 0.75
Smc4Q8CG47 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc4Q8CG47 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.73■□□□□ 0.75
Smc4Q8CG47 Gm43514-201ENSMUST00000198852 424 ntBASIC19.73■□□□□ 0.75
Smc4Q8CG47 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc4Q8CG47 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.72■□□□□ 0.75
Smc4Q8CG47 Gm7230-201ENSMUST00000173026 815 ntBASIC19.72■□□□□ 0.75
Smc4Q8CG47 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Smc4Q8CG47 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Mir5131-201ENSMUST00000175426 93 ntBASIC19.71■□□□□ 0.75
Smc4Q8CG47 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.71■□□□□ 0.75
Smc4Q8CG47 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.71■□□□□ 0.75
Smc4Q8CG47 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc4Q8CG47 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.7■□□□□ 0.74
Smc4Q8CG47 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.7■□□□□ 0.74
Smc4Q8CG47 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smc4Q8CG47 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.7■□□□□ 0.74
Smc4Q8CG47 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc4Q8CG47 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms