Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Vcpip1Q8CDG3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Vcpip1Q8CDG3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vcpip1Q8CDG3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Vcpip1Q8CDG3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vcpip1Q8CDG3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vcpip1Q8CDG3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vcpip1Q8CDG3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 AA414768-201ENSMUST00000121924 1257 ntBASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcpip1Q8CDG3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Gm27389-201ENSMUST00000183622 195 ntBASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Gm33142-201ENSMUST00000193913 867 ntBASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcpip1Q8CDG3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vcpip1Q8CDG3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms