Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Prpf31Q8CCF0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Prpf31Q8CCF0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Gm7862-201ENSMUST00000121461 292 ntBASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Prpf31Q8CCF0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Gm44771-201ENSMUST00000206975 626 ntBASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.5■□□□□ 0.39
Prpf31Q8CCF0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gm4459-201ENSMUST00000118750 468 ntBASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gm9172-201ENSMUST00000212092 954 ntBASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Prpf31Q8CCF0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Gm12497-201ENSMUST00000138778 237 ntBASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Gm18195-201ENSMUST00000207604 706 ntBASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms