Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm9949Q8C9F4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Gm25016-201ENSMUST00000158399 131 ntBASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm9949Q8C9F4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Gm15794-201ENSMUST00000120182 631 ntBASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.66□□□□□ -0.38
Gm9949Q8C9F4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm9949Q8C9F4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gm9949Q8C9F4 Prob1-201ENSMUST00000097619 3021 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms