Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Gm8097-201ENSMUST00000117903 829 ntBASIC18.71■□□□□ 0.59
Alx1Q8C8B0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.71■□□□□ 0.59
Alx1Q8C8B0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Rps4l-201ENSMUST00000071745 943 ntBASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.71■□□□□ 0.59
Alx1Q8C8B0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Alx1Q8C8B0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Gm11780-201ENSMUST00000136880 516 ntBASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Alx1Q8C8B0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Gm4535-201ENSMUST00000182274 558 ntBASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Gm10355-201ENSMUST00000097146 517 ntBASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Alx1Q8C8B0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.67■□□□□ 0.58
Alx1Q8C8B0 Mir8098-201ENSMUST00000184011 137 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms