Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
4933409G03RikQ8C5U0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
4933409G03RikQ8C5U0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Gm2213-201ENSMUST00000197485 688 ntBASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
4933409G03RikQ8C5U0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
4933409G03RikQ8C5U0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.36■□□□□ 0.37
4933409G03RikQ8C5U0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
4933409G03RikQ8C5U0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms