Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3rf3Q8C120 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Gm44430-201ENSMUST00000203376 995 ntBASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3rf3Q8C120 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Gm15794-201ENSMUST00000120182 631 ntBASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3rf3Q8C120 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh3rf3Q8C120 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Sh3rf3Q8C120 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sh3rf3Q8C120 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sh3rf3Q8C120 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sh3rf3Q8C120 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms