Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ube3dQ8BX13 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3dQ8BX13 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.27□□□□□ -0.13
Ube3dQ8BX13 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3dQ8BX13 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3dQ8BX13 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3dQ8BX13 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ube3dQ8BX13 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube3dQ8BX13 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Gm27742-201ENSMUST00000184667 60 ntBASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Gm18115-201ENSMUST00000221209 621 ntBASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ube3dQ8BX13 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube3dQ8BX13 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms